HappyDoc Generated Documentation .\VolumeEraser

. / VolumeEraser 

Functions   
  sphere_grid_bounds 
sphere_grid_bounds (
        grid_data,
        center,
        radius,
        )
  zero_volume_inside_atom 
zero_volume_inside_atom ( atom )
  zero_array_boundary 
zero_array_boundary ( array,  step=1 )
  zero_volume_inside_selection_box 
zero_volume_inside_selection_box ()
  zero_data_in_sphere 
zero_data_in_sphere (
        grid_data,
        center,
        radius,
        )
  redraw_data_region 
redraw_data_region ( dr )
  full_matrices 
full_matrices ( data )
  zero_volume_inside_selected_atom 
zero_volume_inside_selected_atom ()
  volume_sphere 
volume_sphere ( atom,  dr )
  zero_data_outside_sphere 
zero_data_outside_sphere (
        grid_data,
        center,
        radius,
        )
  zero_volume_outside_atom 
zero_volume_outside_atom ( atom )
  norm 
norm ( v )
  active_data_region 
active_data_region ()
  plane_spacings 
plane_spacings ( grid_data )

Spacings in xyz space of jk, ik, and ij planes.

  zero_volume_boundary 
zero_volume_boundary ( step=1 )

The step parameter allows zeroing more than one plane at some of the 6 faces of the volume so that subsampling using every planes will still have zeros on the boundary.

  zero_volume_inside_box 
zero_volume_inside_box (
        data,
        ijk_min,
        ijk_max,
        )
  make_writable_volume_copy 
make_writable_volume_copy ( dr=None )

If active volume data region is not writable (ie. not an using the Array_Grid_Data class) then make a writable copy.

  volume_viewer_dialog 
volume_viewer_dialog ()
Classes   
Python files   

ChimeraExtension.py

gui.py


This document was automatically generated Thu Nov 09 13:33:34 2006 by HappyDoc version 3.0.a1